euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT
   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

11 SRIP in this MRIP Insertion range
StudyID SRIP ID Chromosome Start Stop Strand Sub Group Lineage PCR Reference SampleID GeneName
Stewart2011 srip349 chr1 41502709 41502709 + unknown germline . no 142 LOC100507178;SCMH1
Stewart2011 srip350 chr1 41502709 41502709 + unknown germline . no 147 LOC100507178;SCMH1
Stewart2011 srip351 chr1 41502709 41502709 + unknown germline . no 65 LOC100507178;SCMH1
Helman2014 srip352 chr1 41502711 41502711 + unknown germline . no 869 LOC100507178;SCMH1
Helman2014 srip353 chr1 41502711 41502711 + unknown germline . no 931 LOC100507178;SCMH1
Iskow2010 srip354 chr1 41502714 41502714 + L1-Ta germline . no 665 LOC100507178;SCMH1
Iskow2010 srip355 chr1 41502714 41502714 + L1-Ta germline . no 682 LOC100507178;SCMH1
Lee2012 srip356 chr1 41502718 41502718 + unknown germline validated no 268 LOC100507178;SCMH1
Lee2012 srip357 chr1 41502718 41502718 + unknown germline validated no 267 LOC100507178;SCMH1
Shukla2013 srip358 chr1 41502725 41502725 + L1-Ta germline . no 171 LOC100507178;SCMH1
Shukla2013 srip359 chr1 41502725 41502725 + L1-Ta germline . no 172 LOC100507178;SCMH1